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Adding Antibiotics and other Additives to Agar Media
Why add antibiotics? Antibiotics are added to agar media to select for microorganisms carrying specific resistance genes...
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Aseptic Technique
Aseptic Technique In nature, microorganisms usually exist as mixed populations of different species of bacteria, fungi,...
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Common Problems With Bacterial Culture
Contamination Contamination of bacterial cultures can be very problematic, and may mean the need to reisolate a pure cu...
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Culturing Bacteria from Soil Samples
There are two fundamental applications of dilution and plating of soil bacteria. The first application is the enumeratio...
- Making LB Plates
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Streak Plate Technique
Streak swab of sample over one quarter of the sterile Petri dish in a back-and-forth "tornado" pattern. This is quadrant...
- Extracting DNA from Cheek Cells
- Kit-free Alkaline Lysis Plasmid Miniprep
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Kit-Free DNA Extraction from Hair
DTT Protocol 1. Collect hair sample into a 1.5-ml microcentrifuge tube. 2. Add 500μl digestion buffer. 3. Add 40μl of 1M...
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Lichen DNA Extraction
This protocol describes a CTAB-based DNA extraction method, often used in plant DNA extraction, optimized for lichen tis...
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Pipetting
Introduction The pipette is an essential tool for nearly anyone in molecular biology. You’ll use a pipette in many scena...
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Using a Centrifuge
Ensure a sturdy, level work surface Always ensure the centrifuge is on an appropriate surface prior to operation. Inspec...
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Using a Water Bath
Procedure Ensure that the water bath and water bath cover are cleaned before filling the water bath with water. You may...
- Using the Tetrad 2 thermocycler
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Pouring an Agarose Gel
You can make gels in various concentrations. A standard gel is 1%, which is 1g of agarose in 100ml total buffer. For big...
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QIIME II for High-throughput Analysis
INSTALL MINICONDA Download Distribution https://docs.conda.io/en/latest/miniconda.html Install Distribution `shell bash...
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Biosafety Levels One and Two
Introduction There are four biosafety levels: BSL levels 1 – 4. This protocol provides information for biosafety level 1...
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Lab Safety Protocols
General Wear long pants in the lab: no shorts etc. Wear closed-toe shoes only, no sandals. Wear nitrile/latex gloves at...
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QIIME 2 Pipline
INSTALL MINICONDA Download Distribution https://docs.conda.io/en/latest/miniconda.html Install Distribution bash Minicon...
- Designing Primers
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PCR overview
The polymerase chain reaction (PCR) allows one to use the power of DNA replication to amplify DNA enormously in a short...
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